[INFO] fetching crate deepbiop-utils 0.1.16...
[INFO] testing deepbiop-utils-0.1.16 against master#1f7f8ea0721a3b1eb73e6c6d25cccb371434b320 for pr-154065-1
[INFO] extracting crate deepbiop-utils 0.1.16 into /workspace/builds/worker-6-tc1/source
[INFO] started tweaking crates.io crate deepbiop-utils 0.1.16
[INFO] finished tweaking crates.io crate deepbiop-utils 0.1.16
[INFO] tweaked toml for crates.io crate deepbiop-utils 0.1.16 written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate deepbiop-utils 0.1.16 on toolchain 1f7f8ea0721a3b1eb73e6c6d25cccb371434b320
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate deepbiop-utils 0.1.16 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] a72c653118e1e45a639a4c5050ea36f0b8deb3ed6aa0e1857b210d388758d912
[INFO] running `Command { std: "docker" "start" "-a" "a72c653118e1e45a639a4c5050ea36f0b8deb3ed6aa0e1857b210d388758d912", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "a72c653118e1e45a639a4c5050ea36f0b8deb3ed6aa0e1857b210d388758d912", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a72c653118e1e45a639a4c5050ea36f0b8deb3ed6aa0e1857b210d388758d912", kill_on_drop: false }`
[INFO] [stdout] a72c653118e1e45a639a4c5050ea36f0b8deb3ed6aa0e1857b210d388758d912
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] ed587135ca1b723b1d42380d93fcaca11b970bc428c59f0cb66322b1b6b0ce97
[INFO] running `Command { std: "docker" "start" "-a" "ed587135ca1b723b1d42380d93fcaca11b970bc428c59f0cb66322b1b6b0ce97", kill_on_drop: false }`
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[INFO] [stderr]    Compiling pyo3-stub-gen v0.17.0
[INFO] [stderr]    Compiling deepbiop-utils v0.1.16 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 4m 17s
[INFO] running `Command { std: "docker" "inspect" "ed587135ca1b723b1d42380d93fcaca11b970bc428c59f0cb66322b1b6b0ce97", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ed587135ca1b723b1d42380d93fcaca11b970bc428c59f0cb66322b1b6b0ce97", kill_on_drop: false }`
[INFO] [stdout] ed587135ca1b723b1d42380d93fcaca11b970bc428c59f0cb66322b1b6b0ce97
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] d4c2001ebce49dd423a53d94e0e88cac27cbc06377292772c7c303ab4524ef26
[INFO] running `Command { std: "docker" "start" "-a" "d4c2001ebce49dd423a53d94e0e88cac27cbc06377292772c7c303ab4524ef26", kill_on_drop: false }`
[INFO] [stderr]    Compiling deepbiop-utils v0.1.16 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 4.72s
[INFO] running `Command { std: "docker" "inspect" "d4c2001ebce49dd423a53d94e0e88cac27cbc06377292772c7c303ab4524ef26", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d4c2001ebce49dd423a53d94e0e88cac27cbc06377292772c7c303ab4524ef26", kill_on_drop: false }`
[INFO] [stdout] d4c2001ebce49dd423a53d94e0e88cac27cbc06377292772c7c303ab4524ef26
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1f7f8ea0721a3b1eb73e6c6d25cccb371434b320" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 0889d3cb1867a48d86ff3beddd77ac86a177730d8e5564edca56748567063e96
[INFO] running `Command { std: "docker" "start" "-a" "0889d3cb1867a48d86ff3beddd77ac86a177730d8e5564edca56748567063e96", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.30s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/deepbiop_utils-f4733b29e60c5467)
[INFO] [stdout] 
[INFO] [stdout] running 18 tests
[INFO] [stdout] test interval::genomics::tests::test_segment ... ok
[INFO] [stdout] test interval::op::tests::test_generate_unmaped_intervals ... ok
[INFO] [stdout] test interval::traits::tests::test_overlap_for_range ... ok
[INFO] [stdout] test io::tests::test_sequence_file_type ... ok
[INFO] [stdout] test blat::tests::test_parse_psl ... ok
[INFO] [stdout] test io::tests::test_check_file_type ... ok
[INFO] [stdout] test io::tests::test_is_compressed ... ok
[INFO] [stdout] test interval::op::tests::test_remove_intervals_and_keep_left ... ok
[INFO] [stdout] test io::tests::test_real_example ... ok
[INFO] [stdout] test strategy::tests::test_majority_voting_empty_labels ... ok
[INFO] [stdout] test sv::tests::test_structural_variant_builder ... ok
[INFO] [stdout] test tests::test_highlight ... ok
[INFO] [stdout] test strategy::tests::test_majority_voting_small_window ... ok
[INFO] [stdout] test sv::tests::test_structural_variant_from_str ... ok
[INFO] [stdout] test sv::tests::test_structural_variant_from_str_invalid_format ... ok
[INFO] [stdout] test sv::tests::test_structural_variant_type_from_str ... ok
[INFO] [stdout] test strategy::tests::test_majority_voting2 ... ok
[INFO] [stdout] test strategy::tests::test_majority_voting ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 18 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests deepbiop_utils
[INFO] [stdout] 
[INFO] [stdout] running 5 tests
[INFO] [stdout] test src/io.rs - io::check_compressed_type (line 68) - compile ... ok
[INFO] [stdout] test src/io.rs - io::check_sequence_file_type (line 198) - compile ... ok
[INFO] [stdout] test src/io.rs - io::is_compressed (line 139) - compile ... ok
[INFO] [stdout] test src/interval/genomics.rs - interval::genomics::GenomicInterval::from_str (line 31) ... ok
[INFO] [stdout] test src/sv.rs - sv::StructuralVariant::from_str (line 77) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 3.19s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "0889d3cb1867a48d86ff3beddd77ac86a177730d8e5564edca56748567063e96", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0889d3cb1867a48d86ff3beddd77ac86a177730d8e5564edca56748567063e96", kill_on_drop: false }`
[INFO] [stdout] 0889d3cb1867a48d86ff3beddd77ac86a177730d8e5564edca56748567063e96
